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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789213.1_cds_XP_016495266.1_903
CDS Infomation

[gene=LOC107814363] [db_xref=GeneID:107814363] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016495266.1] [location=10353..11696] [gbkey=CDS]
Sequence

ATGAAGATTAATACTAAATCTTTCAATCTTGTTCCTACATTGGTCTTTTTAGCTTTGTTT
CATCTTTCTTTGGTTTCGTGCAATAAATCCATAGGCAGCCATAGTGCAAATGGTTTCACT
CTTGATCTCATCCATCGTGATTCTCCTCTTTCACCGTTGTACAATCCGTCAAACGCTCCA
TATGACCGTCTCCAAAACGCCTTCCAACGGTCATTTTCTCGAGCTTCTTTCTTCAAGAAA
AACTCCATTAATACAATCCAATCGACTATTGTCCCAATCCCAAGTGAATACCTTATGAAA
ATCTCTATCGGAACTCCAGCAATAGATACCCTTGCCATTGCTGACACTGGTAGTGACTTA
ACATGGATACAATGTGAGCCTTGTGTTGAATGTTTCAAGCAAATGGCACCTATTTTTAAT
CCCAAAAATAGCTCTTCTTACAAAACAATTGGTTGCAAAGAAAAAATATGTCAAGAAGTA
GGATCTTCTGCATGTAAAAATAGCATATGTGGTTATGAAGTGACTTATGGTGACCATTCT
GAAACTAGTGGTGATCTTTCTAGTGAAACTTTCACATTTGCTTCTAATTCTAGTCAAAAT
GTCTCAATTCCTAATATCATCTTTGGTTGTGGACATGACAATGGTGGCACATTCCCAAAC
ACCACTTCTGGCATTATTGGCTTAGGTGGTGGCACTGTCTCAATTGTCAACCAAATGAAT
CAAGAAATCAAAGGGAAATTCTCTTACTGTTTAATTCCATTGGAATCATCATCAACTAAT
TCCAATGCAACTAGTCACATCAACTTTGGCGACAGTGCTATTGTAACTGGTCCTGGCGTC
GTTTCAACTCCCTTGATAAAAAGCGAAGAGACAGAAACATTCTACTTTCTAACTTTAGAA
GGTATCACCGTTGGGAATAAGACTTTGCCATTCAAATATTCTTCTAAACTCAGTTCCAAC
GATCAAGGTAACATTATAATTGATTCAGGTACGACACTTACGCTTCTCCCTTTCGAGTTT
TACTCTGATTTGGAAAAACAATTGGTGGCTTCGATAAATGCTACTAGGAAGGACGATCCA
TCAGGACTTTTTAAGGTATGTTACGAGTCTAAGAATGGCACTATCGATGCTCCCAAACTT
GTCGCACATTTTACGAATGCAGATGTAGAGTTGTCGCCAATAAACACATTTACACAAGTG
GCTGAAGGTTTGGTTTGTTTTACAATATTGCCAGAGGTGGATATTGCTATTTTTGGGAAC
TTGGCACAGAGGAATTTCTTAATTGGATATGATCTTGTGGCTAAAAAAGTTTCCTTTTTG
CCTACTGATTGTACTAAGCATTAA

Peptide Sequence

PEP ID

XP_016495266.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MKINTKSFNLVPTLVFLALFHLSLVSCNKSIGSHSANGFTLDLIHRDSPLSPLYNPSNAP
YDRLQNAFQRSFSRASFFKKNSINTIQSTIVPIPSEYLMKISIGTPAIDTLAIADTGSDL
TWIQCEPCVECFKQMAPIFNPKNSSSYKTIGCKEKICQEVGSSACKNSICGYEVTYGDHS
ETSGDLSSETFTFASNSSQNVSIPNIIFGCGHDNGGTFPNTTSGIIGLGGGTVSIVNQMN
QEIKGKFSYCLIPLESSSTNSNATSHINFGDSAIVTGPGVVSTPLIKSEETETFYFLTLE
GITVGNKTLPFKYSSKLSSNDQGNIIIDSGTTLTLLPFEFYSDLEKQLVASINATRKDDP
SGLFKVCYESKNGTIDAPKLVAHFTNADVELSPINTFTQVAEGLVCFTILPEVDIAIFGN
LAQRNFLIGYDLVAKKVSFLPTDCTKH

Transcript Sequence

Gene sequence data has not been registered.